Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914009.1_cds_XP_016464017.1_57089
CDS Infomation

[gene=LOC107787015] [db_xref=GeneID:107787015] [protein=coiled-coil domain-containing protein 30-like] [protein_id=XP_016464017.1] [location=complement(join(1799..3361,4024..4143,4639..4986))] [gbkey=CDS]
Sequence

ATGATGATCACCGCCAGCAACGCTGAGCTCCCGGCGATTATATTCTCCGAATTAGATCTT
TTGCACAAACCGCCTTATAATACTCGTAAACCGTCTCGTCGGAAAACGAACAACTTCGCC
GCTGCCGGAGTGAAGTTGCGAGGAACTCCTAATGGGAGGAGAAGCAGGCCTGAAACTCCT
CTTCTCCGCTGGAAGTTCAAGGACAATGCCTCTATAAAGGAAGAAACTTCGCCATCGGAG
CTTGATCGGAAATGTAGCCGGAGTGTGGTTTCCGCTAGGAAGTTAGCTGCTGGACTGTTT
AAGCAGCAGCTTCCGGAAGTCAACCACGGTCAAAACTTAGGGTTTCAGGCTGGTCGGGTT
GAGGTGCCCTTTCATTGTCATCATCGCAGTAAAGTGCATGACTCTCACATTAATTCAGTT
CCGAGTCCTCGATCTGTCTTTGGTCCATTAAATGGCCATTTTCACAAGCTAGAACCCTCG
CTTCAGTTTTCCCACTCTGCTATGGAGGGGGCTACAAAGTGGGATCCAGTTGGCTGGACA
ACAGCGGTGGAAACAAATAAGGTATACGGCTATGAGAAGGTTCTTGATCAACAAGTGAAT
ACTGCTTCAATGATTTCTTCCCTTGAGGCAGAACTAGAATGCGCTCGTGCCAGAGTTCAT
CAACTTGAGACAGAACGGCAGTCATCAAAAAAGAAACTCGAACAGTTTTTGAGGAAACTT
AGTGAAGAAAAGGCAGCATGGCGAAGCAGAGATCATGAGAAAATTCGTTCAATTATGGAT
GACATGAGAGCTGACTTCTCCCGAGAGAGGAAAAACCGAAAGAGGCTGGAAATAGTCAAT
TCCAAATTAGTTAATGAGTTGGCTGATGCCAAGTTATCAGCAAAACGCTATCTGCAAAAT
TACGAGAAGGAAAGGCAGGCTAGAGGGTTGATAGAAGAAGTGTGCGATGAATTGGCCAAA
GAACTTGGAGAAGACAAGGCTGAAGTTGAGGAATTGAAGAGGGAATCTCTGAAGTTCACA
GAGGAAGTAGATGAAGAAAGAAAGATGTTGCAGATGGCTGAGGTTTGGCGTGAGGAGCGG
GTTCAGATGAAACTAGTTGATGCTAAGGTGATGCTTGAAGAGAAGTATTCCCAGATGAAG
AAACTAATTGGAGAGCTAGAATCATTTCTAAGTTCTAGAGGTAAGAGTTTGGATGTGGAG
GAGATGAAAAGAGCCGAACAACTCCAACAGGCAGCTGCCTCTTTGAATATTCGTGATATT
AGAGAACTCACGTATGAACCTTCAAATCCAGATGATATTTTCTCCATTTTCGAAGATGCT
CATTTCGTTGAACCTGATGAAAGGGAGATCCAGCCATGTACTGCATATAGTCCTGCAAGC
CATGCCTCCAAGCTTCGCACTCTCAGTCCTGATGGTGATGTTTACAACTTCGACAAACAT
TCTCATGCATATGTCAATCAGAATGATTATATAGAGGAAGAGGGAAGTGAGTGGGAAACA
GTTACTCATCTTGAGGAGCAAGGCTCTAGTTATTCTCCTGAAGGAAGTATTTCATCCGTC
AACAAGTATTGTCGGCACAGCAATGTATCAAGAAGTGGAGCAGGCTGGGAGAGATTTGGT
GGTGATGGCACACCGGTTTCGGAAATTAGTGAAGTATGTTCCGGACCAGCTCAGCAACTT
ACAGAGGTGTCATCTGTATCTAGGTTTCGGAGATCATGCCCACGCAATGGAGACAAGTTC
AAAATAAAATCACTAGAAGGAACTAATGGGAGGCTGTCAAACGGAAGGCTATCGAATGGG
GCCATTCTTTCTCCACATCATGGTTCGAGTAAAGGCGGCTTTAGCCCTTCGGACCTAGGA
AGCCAGTGGAGCTCACCTGACTCGAGCAATCCACGAATAGCACGCGGAATGAAAGGATGC
ATTGAATGGCCACATAACTCTCAGAAGAAAAGCTTAAAAGCAAAGTTATTGCAGGCAAGC
ACAGAGAGCCAGAAGGTCCAGTTGCGCCAGGTCTTGAAGCAGAAGATCTGA

Peptide Sequence

PEP ID

XP_016464017.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein 30-like [Nicotiana tabacum]
Sequence

MMITASNAELPAIIFSELDLLHKPPYNTRKPSRRKTNNFAAAGVKLRGTPNGRRSRPETP
LLRWKFKDNASIKEETSPSELDRKCSRSVVSARKLAAGLFKQQLPEVNHGQNLGFQAGRV
EVPFHCHHRSKVHDSHINSVPSPRSVFGPLNGHFHKLEPSLQFSHSAMEGATKWDPVGWT
TAVETNKVYGYEKVLDQQVNTASMISSLEAELECARARVHQLETERQSSKKKLEQFLRKL
SEEKAAWRSRDHEKIRSIMDDMRADFSRERKNRKRLEIVNSKLVNELADAKLSAKRYLQN
YEKERQARGLIEEVCDELAKELGEDKAEVEELKRESLKFTEEVDEERKMLQMAEVWREER
VQMKLVDAKVMLEEKYSQMKKLIGELESFLSSRGKSLDVEEMKRAEQLQQAAASLNIRDI
RELTYEPSNPDDIFSIFEDAHFVEPDEREIQPCTAYSPASHASKLRTLSPDGDVYNFDKH
SHAYVNQNDYIEEEGSEWETVTHLEEQGSSYSPEGSISSVNKYCRHSNVSRSGAGWERFG
GDGTPVSEISEVCSGPAQQLTEVSSVSRFRRSCPRNGDKFKIKSLEGTNGRLSNGRLSNG
AILSPHHGSSKGGFSPSDLGSQWSSPDSSNPRIARGMKGCIEWPHNSQKKSLKAKLLQAS
TESQKVQLRQVLKQKI

Transcript Sequence

Gene sequence data has not been registered.